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Set out eggs, yogurt, and whole milk to bring them to room temperature.
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Melt the butter needed for the crumble topping. Cool.
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Position oven rack in center of oven and preheat oven to 475°F.
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Prepare muffin tray by spraying each muffin cup with non-stick cooking spray or greasing individually, ensuring the top of the muffin tin tray is also well-greased/sprayed. Alternatively, the muffin cups can be lined with paper liners.
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In a large bowl, whisk the flours, baking powder, baking soda, salt, and spices together. Make a well in the center of the dry ingredients. Set aside.
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In medium-sized bowl, whisk together the vegetable oil, sugars, eggs, yogurt, milk, and vanilla and almond extracts.
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Pour the wet ingredients into the dry and stir only until barely incorporated. Do not overmix. Gently fold in the peaches and pecans. Spoon batter into prepared muffin cups, filling each cup almost to the rim.